Two sample MR report


HLA-DQA2_Conventional Dendritic Cell against finn-b-ASTHMA_ALLERG_EXMORE

Date: 13 January, 2026


Results from two sample MR:

method nsnp b se pval
MR Egger 3 0.2528950 1.5476050 0.8968810
Weighted median 3 0.1638141 0.0695586 0.0185202
Inverse variance weighted 3 0.1627887 0.0560947 0.0037075
Simple mode 3 0.1646562 0.0798552 0.1753302
Weighted mode 3 0.1649805 0.0834916 0.1868072

Heterogeneity tests

method Q Q_df Q_pval
MR Egger 0.0024782 1 0.9602964
Inverse variance weighted 0.0058726 2 0.9970680

Test for directional horizontal pleiotropy

egger_intercept se pval
-0.0310862 0.5335652 0.9629516

Test that the exposure is upstream of the outcome

snp_r2.exposure snp_r2.outcome correct_causal_direction steiger_pval
3.25e-05 0 TRUE 0.5903087

Note - R^2 values are approximate


Forest plot of single SNP MR

plot of chunk chunk5


Comparison of results using different MR methods

plot of chunk chunk6


Funnel plot

plot of chunk chunk7


Leave-one-out sensitivity analysis

plot of chunk chunk8